Package: viewpoly 0.4.1

Cristiane Taniguti

viewpoly: A Shiny App to Visualize Genetic Maps and QTL Analysis in Polyploid Species

Provides a graphical user interface to integrate, visualize and explore results from linkage and quantitative trait loci analysis, together with genomic information for autopolyploid species. The app is meant for interactive use and allows users to optionally upload different sources of information, including gene annotation and alignment files, enabling the exploitation and search for candidate genes in a genome browser. In its current version, 'VIEWpoly' supports inputs from 'MAPpoly', 'polymapR', 'diaQTL', 'QTLpoly', 'polyqtlR', 'GWASpoly', and 'HIDECAN' packages.

Authors:Cristiane Taniguti [aut, cre], Gabriel de Siqueira Gesteira [aut], Jeekin Lau [aut], Olivia Angelin-Bonnet [aut], Susan Thomson [ctb], Guilherme da Silva Pereira [ctb], David Byrne [ctb], Zhao-Bang Zeng [ctb], Oscar Riera-Lizarazu [ctb], Marcelo Mollinari [aut]

viewpoly_0.4.1.tar.gz
viewpoly_0.4.1.zip(r-4.5)viewpoly_0.4.1.zip(r-4.4)viewpoly_0.4.1.zip(r-4.3)
viewpoly_0.4.1.tgz(r-4.4-any)viewpoly_0.4.1.tgz(r-4.3-any)
viewpoly_0.4.1.tar.gz(r-4.5-noble)viewpoly_0.4.1.tar.gz(r-4.4-noble)
viewpoly_0.4.1.tgz(r-4.4-emscripten)viewpoly_0.4.1.tgz(r-4.3-emscripten)
viewpoly.pdf |viewpoly.html✨
viewpoly/json (API)
NEWS

# Install 'viewpoly' in R:

install.packages('viewpoly', repos = c('https://mmollina.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mmollina/viewpoly/issues

On CRAN:

4.38 score 4 stars 2 scripts 181 downloads 1 exports 136 dependencies

Last updated 11 months agofrom:561ed5e0c2. Checks:OK: 3 ERROR: 1 NOTE: 3. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Oct 29 2024
R-4.5-win	NOTE	Oct 29 2024
R-4.5-linux	ERROR	Oct 29 2024
R-4.4-win	NOTE	Oct 29 2024
R-4.4-mac	NOTE	Oct 29 2024
R-4.3-win	OK	Oct 29 2024
R-4.3-mac	OK	Oct 29 2024